Heuristic Online Phenotype Prediction

MPSE standards

The following table details the standard signature probe sets, their corresponding genes, and their phenotype-specific expression values (Proliferative and Invasive). Only the shaded cells appear in the standard signature file, the rest is just provided for your information.

Probe set	Symbol	Title	Proliferative	Invasive	Phenotype
222294_s_at	---	---	16.675	4.442	Proliferative
204638_at	ACP5	acid phosphatase 5, tartrate resistant	16.94	3.8275	Proliferative
213217_at	ADCY2	adenylate cyclase 2 (brain)	4.263	0.6735	Proliferative
203382_s_at	APOE	apolipoprotein E	16.02	2.211	Proliferative
203381_s_at	APOE	apolipoprotein E	25.515	2.787	Proliferative
213902_at	ASAH1	N-acylsphingosine amidohydrolase (acid ceramidase) 1	36.02	11.03	Proliferative
210980_s_at	ASAH1	N-acylsphingosine amidohydrolase (acid ceramidase) 1	83.565	23.32	Proliferative
213702_x_at	ASAH1	N-acylsphingosine amidohydrolase (acid ceramidase) 1	109.35	39.19	Proliferative
220451_s_at	BIRC7	baculoviral IAP repeat-containing 7	12.575	1.65	Proliferative
220941_s_at	C21orf91	chromosome 21 open reading frame 91	6.669	1.6525	Proliferative
211890_x_at	CAPN3	calpain 3, (p94)	42.32	1.4	Proliferative
214475_x_at	CAPN3	calpain 3, (p94)	47.495	0.9265	Proliferative
201131_s_at	CDH1	cadherin 1, type 1, E-cadherin (epithelial)	1.379	0.214	Proliferative
211804_s_at	CDK2	cyclin-dependent kinase 2	40.085	6.9255	Proliferative
204252_at	CDK2	cyclin-dependent kinase 2	64.435	15.03	Proliferative
204995_at	CDK5R1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	4.7575	1.076	Proliferative
209498_at	CEACAM1	carcinoembryonic antigen-related cell adhesion molecule 1	11.015	1.3005	Proliferative
203139_at	DAPK1	death-associated protein kinase 1	8.5955	2.7345	Proliferative
216513_at	DCT	dopachrome tautomerase	8.893	0.607	Proliferative
216512_s_at	DCT	dopachrome tautomerase	91.09	1.1255	Proliferative
205337_at	DCT	dopachrome tautomerase	105.85	0.666	Proliferative
205338_s_at	DCT	dopachrome tautomerase	122.3	1.3885	Proliferative
51158_at	FAM174B	family with sequence similarity 174, member B	2.565	0.8455	Proliferative
203397_s_at	GALNT3	UDP-N-acetyl- -D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	9.4	0.3305	Proliferative
212959_s_at	GNPTAB	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	33.74	12.87	Proliferative
209169_at	GPM6B	glycoprotein M6B	15.035	1.173	Proliferative
209168_at	GPM6B	glycoprotein M6B	17.415	1.9235	Proliferative
209167_at	GPM6B	glycoprotein M6B	59.38	4.4745	Proliferative
209170_s_at	GPM6B	glycoprotein M6B	76.9	6.255	Proliferative
206696_at	GPR143	G protein-coupled receptor 143	30.905	0.711	Proliferative
203632_s_at	GPRC5B	G protein-coupled receptor, family C, group 5, member B	18.065	4.647	Proliferative
210964_s_at	GYG2	glycogenin 2	11.44	1.197	Proliferative
54037_at	HPS4	Hermansky-Pudlak syndrome 4	7.389	2.132	Proliferative
218402_s_at	HPS4	Hermansky-Pudlak syndrome 4	10.46	3.1065	Proliferative
205376_at	INPP4B	inositol polyphosphate-4-phosphatase, type II, 105kDa	22.035	6.794	Proliferative
204562_at	IRF4	interferon regulatory factor 4	9.8115	1.59	Proliferative
201362_at	IVNS1ABP	influenza virus NS1A binding protein	21.455	8.854	Proliferative
213478_at	KAZ	kazrin	16.1	5.269	Proliferative
207323_s_at	MBP	myelin basic protein	19.69	1.692	Proliferative
209072_at	MBP	myelin basic protein	60.56	1.401	Proliferative
218376_s_at	MICAL1	microtubule associated monoxygenase, calponin and LIM domain containing 1	11.975	3.966	Proliferative
207233_s_at	MITF	microphthalmia-associated transcription factor	104.35	8.1345	Proliferative
206426_at	MLANA	melan-A	74.925	0.524	Proliferative
206427_s_at	MLANA	melan-A	187.6	0.687	Proliferative
212338_at	MYO1D	myosin ID	7.438	1.554	Proliferative
207978_s_at	NR4A3	nuclear receptor subfamily 4, group A, member 3	4.151	0.831	Proliferative
209959_at	NR4A3	nuclear receptor subfamily 4, group A, member 3	8.4255	1.4925	Proliferative
206498_at	OCA2	oculocutaneous albinism II	11.65	1.2525	Proliferative
213638_at	PHACTR1	phosphatase and actin regulator 1	26.65	2.1535	Proliferative
207469_s_at	PIR	pirin (iron-binding nuclear protein)	66.83	12.785	Proliferative
206470_at	PLXNC1	plexin C1	4.304	0.6245	Proliferative
206471_s_at	PLXNC1	plexin C1	4.7685	0.477	Proliferative
213241_at	PLXNC1	plexin C1	24.825	1.1	Proliferative
209848_s_at	PMEL	Premelanosome protein	246.95	1.1995	Proliferative
209515_s_at	RAB27A	RAB27A, member RAS oncogene family	37.705	9.7065	Proliferative
219412_at	RAB38	RAB38, member RAS oncogene family	56.49	7.02	Proliferative
210138_at	RGS20	regulator of G-protein signaling 20	10.285	3.3555	Proliferative
212122_at	RHOQ	ras homolog gene family, member Q	11.285	4.0495	Proliferative
212119_at	RHOQ	ras homolog gene family, member Q	56.235	22.075	Proliferative
221523_s_at	RRAGD	Ras-related GTP binding D	11.63	2.598	Proliferative
221524_s_at	RRAGD	Ras-related GTP binding D	37.775	8.878	Proliferative
215028_at	SEMA6A	sema domain, transmembrane domain, and cytoplasmic domain, 6A	1.9475	0.298	Proliferative
202896_s_at	SIRPA	signal-regulatory protein alpha	10.815	4.349	Proliferative
202897_at	SIRPA	signal-regulatory protein alpha	14.555	4.726	Proliferative
221644_s_at	SLC45A2	solute carrier family 45, member 2	23.145	0.498	Proliferative
220245_at	SLC45A2	solute carrier family 45, member 2	37.72	1.332	Proliferative
210942_s_at	ST3GAL6	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	21.465	3.4385	Proliferative
212631_at	STX7	syntaxin 7	19.095	5.9865	Proliferative
209354_at	TNFRSF14	tumor necrosis factor receptor superfamily, member 14	13.19	2.4515	Proliferative
206479_at	TRPM1	transient receptor potential cation channel, subfamily M, member 1	1.188	0.2095	Proliferative
206630_at	TYR	tyrosinase	133.85	1.8765	Proliferative
205694_at	TYRP1	tyrosinase-related protein 1	73.23	0.745	Proliferative
218971_s_at	WDR91	WD repeat domain 91	7.699	3.332	Proliferative
203651_at	ZFYVE16	zinc finger, FYVE domain containing 16	19.94	5.565	Proliferative
213790_at	ADAM12	ADAM metallopeptidase domain 12	0.3545	1.387	Invasive
202952_s_at	ADAM12	ADAM metallopeptidase domain 12	0.591	3.175	Invasive
203002_at	AMOTL2	angiomotin like 2	4.554	11.315	Invasive
202686_s_at	AXL	AXL receptor tyrosine kinase	0.8225	27.955	Invasive
210538_s_at	BIRC3	baculoviral IAP repeat-containing 3	0.2515	1.141	Invasive
204726_at	CDH13	cadherin 13, H-cadherin (heart)	0.166	2.12	Invasive
204604_at	CDK14	cyclin-dependent kinase 14	2.168	6.3055	Invasive
211343_s_at	COL13A1	collagen, type XIII, alpha 1	0.305	4.8645	Invasive
202552_s_at	CRIM1	cysteine rich transmembrane BMP regulator 1 (chordin-like)	0.827	7.5345	Invasive
202551_s_at	CRIM1	cysteine rich transmembrane BMP regulator 1 (chordin-like)	1.3245	15.83	Invasive
221541_at	CRISPLD2	cysteine-rich secretory protein LCCL domain containing 2	0.7625	2.0775	Invasive
210764_s_at	CYR61	cysteine-rich, angiogenic inducer, 61	2.255	21.695	Invasive
201289_at	CYR61	cysteine-rich, angiogenic inducer, 61	3.589	35.96	Invasive
204646_at	DPYD	dihydropyrimidine dehydrogenase	0.3965	6.108	Invasive
201842_s_at	EFEMP1	EGF-containing fibulin-like extracellular matrix protein 1	0.429	8.129	Invasive
201983_s_at	EGFR	epidermal growth factor receptor	0.4825	3.8605	Invasive
213506_at	F2RL1	coagulation factor II (thrombin) receptor-like 1	0.1935	1.327	Invasive
204421_s_at	FGF2	fibroblast growth factor 2 (basic)	1.1395	3.1335	Invasive
208614_s_at	FLNB	filamin B, beta	3.1465	11.825	Invasive
206307_s_at	FOXD1	forkhead box D1	3.3845	10.725	Invasive
204948_s_at	FST	Follistatin	2.495	12.765	Invasive
210220_at	FZD2	frizzled homolog 2 (Drosophila)	1.387	5.4265	Invasive
212822_at	HEG1	HEG homolog 1 (zebrafish)	3.216	9.145	Invasive
213069_at	HEG1	HEG homolog 1 (zebrafish)	5.844	18.235	Invasive
219985_at	HS3ST3A1	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	0.268	1.668	Invasive
205032_at	ITGA2	integrin, alpha 2	1.337	4.5465	Invasive
201474_s_at	ITGA3	integrin, alpha 3	2.364	8.88	Invasive
221583_s_at	KCNMA1	potassium large conductance calcium-activated channel M alpha 1	0.2425	1.497	Invasive
221584_s_at	KCNMA1	potassium large conductance calcium-activated channel M alpha 1	0.586	7.361	Invasive
202998_s_at	LOXL2	lysyl oxidase-like 2	2.124	50.455	Invasive
211864_s_at	MYOF	myoferlin	7.407	26.005	Invasive
212298_at	NRP1	neuropilin 1	0.266	16.01	Invasive
210510_s_at	NRP1	neuropilin 1	0.7485	7.023	Invasive
222020_s_at	NTM	neurotrimin	0.6305	3.9455	Invasive
204589_at	NUAK1	NUAK family, SNF1-like kinase, 1	1.211	4.0785	Invasive
205729_at	OSMR	oncostatin M receptor	0.9445	6.1405	Invasive
218718_at	PDGFC	platelet derived growth factor C	1.396	13.08	Invasive
201578_at	PODXL	podocalyxin-like	0.825	6.537	Invasive
204268_at	S100A2	S100 calcium binding protein A2	1.4025	3.8375	Invasive
205896_at	SLC22A4	solute carrier family 22, member 4	0.5805	1.9755	Invasive
209897_s_at	SLIT2	slit homolog 2	1.0365	3.6665	Invasive
210612_s_at	SYNJ2	synaptojanin 2	0.976	3.196	Invasive
212382_at	TCF4	transcription factor 4	0.358	1.605	Invasive
203753_at	TCF4	transcription factor 4	0.402	2.848	Invasive
213891_s_at	TCF4	transcription factor 4	0.43	3.315	Invasive
201110_s_at	THBS1	thrombospondin 1	0.8315	24.895	Invasive
201109_s_at	THBS1	thrombospondin 1	1.048	42.19	Invasive
216997_x_at	TLE4	transducin-like enhancer of split 4	0.1985	0.888	Invasive
204872_at	TLE4	transducin-like enhancer of split 4	0.853	5.4715	Invasive
204932_at	TNFRSF11B	tumor necrosis factor receptor superfamily, member 11b	0.2045	1.108	Invasive
203476_at	TPBG	trophoblast glycoprotein	1.0845	17.96	Invasive
206116_s_at	TPM1	tropomyosin 1 (alpha)	7.6335	51.005	Invasive
210987_x_at	TPM1	tropomyosin 1 (alpha)	12.585	83.55	Invasive
210986_s_at	TPM1	tropomyosin 1 (alpha)	18.35	99.125	Invasive
202369_s_at	TRAM2	translocation associated membrane protein 2	12.505	27.435	Invasive
213425_at	WNT5A	wingless-type MMTV integration site family, member 5A	0.284	7.6665	Invasive
205990_s_at	WNT5A	wingless-type MMTV integration site family, member 5A	0.631	20.68	Invasive
210875_s_at	ZEB1	zinc finger E-box binding homeobox 1	0.248	2.0565	Invasive
212764_at	ZEB1	zinc finger E-box binding homeobox 1	0.516	8.2985	Invasive
212758_s_at	ZEB1	zinc finger E-box binding homeobox 1	0.796	3.4985	Invasive